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Table 2 Sample sizes and accuracy metrics for GARP model building and evaluation Table 3

From: Ecological Niche Modelling of the Bacillus anthracis A1.a sub-lineage in Kazakhstan

  Model
Metric Outbreak-Soil A1.a sub-lineage Large Southern Outbreak Small Southern Outbreak
N to build models* 218 26 113 26
N to test models 39 13 145 147
Total Omission 2.6 0.0 0.0 0.0
Average Omission 9.9 13.1 19.1 15.5
Total Commission 32.7 19.18 12.74 17
Average Commission 58.4 66.11 49.26 56.35
AUC† 0.7188 0.6964 0.7401 0.7386
SE 0.0466 0.0817 0.2410 0.04
Z 90.94 4.4449 16.3284 16.6241
  1. *N was divided into 50%training/50% testing for each model iteration
  2. †AUC = area under the curve
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BMC Ecology

ISSN: 1472-6785

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